Merge main HEAD (segment 5) into sandboxed-agent-rebase

Resolve 83 conflicts: 10 backend, 62 frontend, 11 config/lock files.
Preserve sandbox/agent/collaboration features while adopting main's
UI refactorings (Dialog/AlertDialog/Popover), model provider updates,
and enterprise features.

Made-with: Cursor

.github/workflows/anti-slop.yml

@@ -12,7 +12,7 @@ jobs:
   anti-slop:
     runs-on: ubuntu-latest
     steps:
-      - uses: peakoss/anti-slop@v0
+      - uses: peakoss/anti-slop@85daca1880e9e1af197fc06ea03349daf08f4202 # v0.2.1
         with:
           github-token: ${{ secrets.GITHUB_TOKEN }}
           close-pr: false

.github/workflows/api-tests.yml

@@ -2,6 +2,12 @@ name: Run Pytest
 
 on:
   workflow_call:
+    secrets:
+      CODECOV_TOKEN:
+        required: false
+
+permissions:
+  contents: read
 
 concurrency:
   group: api-tests-${{ github.head_ref || github.run_id }}
@@ -11,6 +17,8 @@ jobs:
   test:
     name: API Tests
     runs-on: ubuntu-latest
+    env:
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
     defaults:
       run:
         shell: bash
@@ -24,10 +32,11 @@ jobs:
       - name: Checkout code
         uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
         with:
+          fetch-depth: 0
           persist-credentials: false
 
       - name: Setup UV and Python
-        uses: astral-sh/setup-uv@6ee6290f1cbc4156c0bdd66691b2c144ef8df19a # v7.4.0
+        uses: astral-sh/setup-uv@37802adc94f370d6bfd71619e3f0bf239e1f3b78 # v7.6.0
         with:
           enable-cache: true
           python-version: ${{ matrix.python-version }}
@@ -79,21 +88,12 @@ jobs:
             api/tests/test_containers_integration_tests \
             api/tests/unit_tests
 
-      - name: Coverage Summary
-        run: |
-          set -x
-          # Extract coverage percentage and create a summary
-          TOTAL_COVERAGE=$(python -c 'import json; print(json.load(open("coverage.json"))["totals"]["percent_covered_display"])')
-
-          # Create a detailed coverage summary
-          echo "### Test Coverage Summary :test_tube:" >> $GITHUB_STEP_SUMMARY
-          echo "Total Coverage: ${TOTAL_COVERAGE}%" >> $GITHUB_STEP_SUMMARY
-          {
-            echo ""
-            echo "<details><summary>File-level coverage (click to expand)</summary>"
-            echo ""
-            echo '```'
-            uv run --project api coverage report -m
-            echo '```'
-            echo "</details>"
-          } >> $GITHUB_STEP_SUMMARY
+      - name: Report coverage
+        if: ${{ env.CODECOV_TOKEN != '' && matrix.python-version == '3.12' }}
+        uses: codecov/codecov-action@1af58845a975a7985b0beb0cbe6fbbb71a41dbad # v5.5.3
+        with:
+          files: ./coverage.xml
+          disable_search: true
+          flags: api
+        env:
+          CODECOV_TOKEN: ${{ env.CODECOV_TOKEN }}

.github/workflows/autofix.yml

@@ -39,7 +39,7 @@ jobs:
         with:
           python-version: "3.11"
 
-      - uses: astral-sh/setup-uv@6ee6290f1cbc4156c0bdd66691b2c144ef8df19a # v7.4.0
+      - uses: astral-sh/setup-uv@37802adc94f370d6bfd71619e3f0bf239e1f3b78 # v7.6.0
 
       - name: Generate Docker Compose
         if: steps.docker-compose-changes.outputs.any_changed == 'true'
@@ -94,11 +94,6 @@ jobs:
           find . -name "*.py" -type f -exec sed -i.bak -E 's/"([^"]+)" \| None/Optional["\1"]/g; s/'"'"'([^'"'"']+)'"'"' \| None/Optional['"'"'\1'"'"']/g' {} \;
           find . -name "*.py.bak" -type f -delete
 
-      # mdformat breaks YAML front matter in markdown files. Add --exclude for directories containing YAML front matter.
-      - name: mdformat
-        run: |
-          uvx --python 3.13 mdformat . --exclude ".agents/skills/**"
-
       - name: Setup web environment
         if: steps.web-changes.outputs.any_changed == 'true'
         uses: ./.github/actions/setup-web

.github/workflows/build-push.yml

@@ -115,7 +115,7 @@ jobs:
             context: "web"
     steps:
       - name: Download digests
-        uses: actions/download-artifact@70fc10c6e5e1ce46ad2ea6f2b72d43f7d47b13c3 # v8.0.0
+        uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1
         with:
           path: /tmp/digests
           pattern: digests-${{ matrix.context }}-*

.github/workflows/db-migration-test.yml

@@ -19,7 +19,7 @@ jobs:
           persist-credentials: false
 
       - name: Setup UV and Python
-        uses: astral-sh/setup-uv@6ee6290f1cbc4156c0bdd66691b2c144ef8df19a # v7.4.0
+        uses: astral-sh/setup-uv@37802adc94f370d6bfd71619e3f0bf239e1f3b78 # v7.6.0
         with:
           enable-cache: true
           python-version: "3.12"
@@ -69,7 +69,7 @@ jobs:
           persist-credentials: false
 
       - name: Setup UV and Python
-        uses: astral-sh/setup-uv@6ee6290f1cbc4156c0bdd66691b2c144ef8df19a # v7.4.0
+        uses: astral-sh/setup-uv@37802adc94f370d6bfd71619e3f0bf239e1f3b78 # v7.6.0
         with:
           enable-cache: true
           python-version: "3.12"

.github/workflows/main-ci.yml

@@ -28,7 +28,7 @@ jobs:
       migration-changed: ${{ steps.changes.outputs.migration }}
     steps:
       - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
-      - uses: dorny/paths-filter@de90cc6fb38fc0963ad72b210f1f284cd68cea36 # v3.0.2
+      - uses: dorny/paths-filter@fbd0ab8f3e69293af611ebaee6363fc25e6d187d # v4.0.1
         id: changes
         with:
           filters: |
@@ -56,15 +56,14 @@ jobs:
     needs: check-changes
     if: needs.check-changes.outputs.api-changed == 'true'
     uses: ./.github/workflows/api-tests.yml
+    secrets: inherit
 
   web-tests:
     name: Web Tests
     needs: check-changes
     if: needs.check-changes.outputs.web-changed == 'true'
     uses: ./.github/workflows/web-tests.yml
-    with:
-      base_sha: ${{ github.event_name == 'pull_request' && github.event.pull_request.base.sha || github.event.before }}
-      head_sha: ${{ github.event_name == 'pull_request' && github.event.pull_request.head.sha || github.sha }}
+    secrets: inherit
 
   style-check:
     name: Style Check

.github/workflows/pyrefly-diff.yml

@@ -22,7 +22,7 @@ jobs:
           fetch-depth: 0
 
       - name: Setup Python & UV
-        uses: astral-sh/setup-uv@6ee6290f1cbc4156c0bdd66691b2c144ef8df19a # v7.4.0
+        uses: astral-sh/setup-uv@37802adc94f370d6bfd71619e3f0bf239e1f3b78 # v7.6.0
         with:
           enable-cache: true
 

.github/workflows/style.yml

@@ -33,7 +33,7 @@ jobs:
 
       - name: Setup UV and Python
         if: steps.changed-files.outputs.any_changed == 'true'
-        uses: astral-sh/setup-uv@6ee6290f1cbc4156c0bdd66691b2c144ef8df19a # v7.4.0
+        uses: astral-sh/setup-uv@37802adc94f370d6bfd71619e3f0bf239e1f3b78 # v7.6.0
         with:
           enable-cache: false
           python-version: "3.12"

.github/workflows/translate-i18n-claude.yml

@@ -120,7 +120,7 @@ jobs:
 
       - name: Run Claude Code for Translation Sync
         if: steps.detect_changes.outputs.CHANGED_FILES != ''
-        uses: anthropics/claude-code-action@26ec041249acb0a944c0a47b6c0c13f05dbc5b44 # v1.0.70
+        uses: anthropics/claude-code-action@6062f3709600659be5e47fcddf2cf76993c235c2 # v1.0.76
         with:
           anthropic_api_key: ${{ secrets.ANTHROPIC_API_KEY }}
           github_token: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/vdb-tests.yml

@@ -31,7 +31,7 @@ jobs:
           remove_tool_cache: true
 
       - name: Setup UV and Python
-        uses: astral-sh/setup-uv@6ee6290f1cbc4156c0bdd66691b2c144ef8df19a # v7.4.0
+        uses: astral-sh/setup-uv@37802adc94f370d6bfd71619e3f0bf239e1f3b78 # v7.6.0
         with:
           enable-cache: true
           python-version: ${{ matrix.python-version }}

.github/workflows/web-tests.yml

@@ -2,13 +2,9 @@ name: Web Tests
 
 on:
   workflow_call:
-    inputs:
-      base_sha:
+    secrets:
+      CODECOV_TOKEN:
         required: false
-        type: string
-      head_sha:
-        required: false
-        type: string
 
 permissions:
   contents: read
@@ -26,8 +22,8 @@ jobs:
     strategy:
       fail-fast: false
       matrix:
-        shardIndex: [1, 2, 3, 4]
-        shardTotal: [4]
+        shardIndex: [1, 2, 3, 4, 5, 6]
+        shardTotal: [6]
     defaults:
       run:
         shell: bash
@@ -60,7 +56,7 @@ jobs:
     needs: [test]
     runs-on: ubuntu-latest
     env:
-      VITEST_COVERAGE_SCOPE: app-components
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
     defaults:
       run:
         shell: bash
@@ -77,346 +73,23 @@ jobs:
         uses: ./.github/actions/setup-web
 
       - name: Download blob reports
-        uses: actions/download-artifact@70fc10c6e5e1ce46ad2ea6f2b72d43f7d47b13c3 # v8.0.0
+        uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1
         with:
           path: web/.vitest-reports
           pattern: blob-report-*
           merge-multiple: true
 
       - name: Merge reports
-        run: vp test --merge-reports --reporter=json --reporter=agent --coverage
+        run: vp test --merge-reports --coverage --silent=passed-only
 
-      - name: Check app/components diff coverage
-        env:
-          BASE_SHA: ${{ inputs.base_sha }}
-          HEAD_SHA: ${{ inputs.head_sha }}
-        run: node ./scripts/check-components-diff-coverage.mjs
-
-      - name: Coverage Summary
-        if: always()
-        id: coverage-summary
-        run: |
-          set -eo pipefail
-
-          COVERAGE_FILE="coverage/coverage-final.json"
-          COVERAGE_SUMMARY_FILE="coverage/coverage-summary.json"
-
-          if [ ! -f "$COVERAGE_FILE" ] && [ ! -f "$COVERAGE_SUMMARY_FILE" ]; then
-            echo "has_coverage=false" >> "$GITHUB_OUTPUT"
-            echo "### 🚨 Test Coverage Report :test_tube:" >> "$GITHUB_STEP_SUMMARY"
-            echo "Coverage data not found. Ensure Vitest runs with coverage enabled." >> "$GITHUB_STEP_SUMMARY"
-            exit 0
-          fi
-
-          echo "has_coverage=true" >> "$GITHUB_OUTPUT"
-
-          node <<'NODE' >> "$GITHUB_STEP_SUMMARY"
-          const fs = require('fs');
-          const path = require('path');
-          let libCoverage = null;
-
-          try {
-            libCoverage = require('istanbul-lib-coverage');
-          } catch (error) {
-            libCoverage = null;
-          }
-
-          const summaryPath = path.join('coverage', 'coverage-summary.json');
-          const finalPath = path.join('coverage', 'coverage-final.json');
-
-          const hasSummary = fs.existsSync(summaryPath);
-          const hasFinal = fs.existsSync(finalPath);
-
-          if (!hasSummary && !hasFinal) {
-            console.log('### Test Coverage Summary :test_tube:');
-            console.log('');
-            console.log('No coverage data found.');
-            process.exit(0);
-          }
-
-          const summary = hasSummary
-            ? JSON.parse(fs.readFileSync(summaryPath, 'utf8'))
-            : null;
-          const coverage = hasFinal
-            ? JSON.parse(fs.readFileSync(finalPath, 'utf8'))
-            : null;
-
-          const getLineCoverageFromStatements = (statementMap, statementHits) => {
-            const lineHits = {};
-
-            if (!statementMap || !statementHits) {
-              return lineHits;
-            }
-
-            Object.entries(statementMap).forEach(([key, statement]) => {
-              const line = statement?.start?.line;
-              if (!line) {
-                return;
-              }
-              const hits = statementHits[key] ?? 0;
-              const previous = lineHits[line];
-              lineHits[line] = previous === undefined ? hits : Math.max(previous, hits);
-            });
-
-            return lineHits;
-          };
-
-          const getFileCoverage = (entry) => (
-            libCoverage ? libCoverage.createFileCoverage(entry) : null
-          );
-
-          const getLineHits = (entry, fileCoverage) => {
-            const lineHits = entry.l ?? {};
-            if (Object.keys(lineHits).length > 0) {
-              return lineHits;
-            }
-            if (fileCoverage) {
-              return fileCoverage.getLineCoverage();
-            }
-            return getLineCoverageFromStatements(entry.statementMap ?? {}, entry.s ?? {});
-          };
-
-          const getUncoveredLines = (entry, fileCoverage, lineHits) => {
-            if (lineHits && Object.keys(lineHits).length > 0) {
-              return Object.entries(lineHits)
-                .filter(([, count]) => count === 0)
-                .map(([line]) => Number(line))
-                .sort((a, b) => a - b);
-            }
-            if (fileCoverage) {
-              return fileCoverage.getUncoveredLines();
-            }
-            return [];
-          };
-
-          const totals = {
-            lines: { covered: 0, total: 0 },
-            statements: { covered: 0, total: 0 },
-            branches: { covered: 0, total: 0 },
-            functions: { covered: 0, total: 0 },
-          };
-          const fileSummaries = [];
-
-          if (summary) {
-            const totalEntry = summary.total ?? {};
-            ['lines', 'statements', 'branches', 'functions'].forEach((key) => {
-              if (totalEntry[key]) {
-                totals[key].covered = totalEntry[key].covered ?? 0;
-                totals[key].total = totalEntry[key].total ?? 0;
-              }
-            });
-
-            Object.entries(summary)
-              .filter(([file]) => file !== 'total')
-              .forEach(([file, data]) => {
-                fileSummaries.push({
-                  file,
-                  pct: data.lines?.pct ?? data.statements?.pct ?? 0,
-                  lines: {
-                    covered: data.lines?.covered ?? 0,
-                    total: data.lines?.total ?? 0,
-                  },
-                });
-              });
-          } else if (coverage) {
-            Object.entries(coverage).forEach(([file, entry]) => {
-              const fileCoverage = getFileCoverage(entry);
-              const lineHits = getLineHits(entry, fileCoverage);
-              const statementHits = entry.s ?? {};
-              const branchHits = entry.b ?? {};
-              const functionHits = entry.f ?? {};
-
-              const lineTotal = Object.keys(lineHits).length;
-              const lineCovered = Object.values(lineHits).filter((n) => n > 0).length;
-
-              const statementTotal = Object.keys(statementHits).length;
-              const statementCovered = Object.values(statementHits).filter((n) => n > 0).length;
-
-              const branchTotal = Object.values(branchHits).reduce((acc, branches) => acc + branches.length, 0);
-              const branchCovered = Object.values(branchHits).reduce(
-                (acc, branches) => acc + branches.filter((n) => n > 0).length,
-                0,
-              );
-
-              const functionTotal = Object.keys(functionHits).length;
-              const functionCovered = Object.values(functionHits).filter((n) => n > 0).length;
-
-              totals.lines.total += lineTotal;
-              totals.lines.covered += lineCovered;
-              totals.statements.total += statementTotal;
-              totals.statements.covered += statementCovered;
-              totals.branches.total += branchTotal;
-              totals.branches.covered += branchCovered;
-              totals.functions.total += functionTotal;
-              totals.functions.covered += functionCovered;
-
-              const pct = (covered, tot) => (tot > 0 ? (covered / tot) * 100 : 0);
-
-              fileSummaries.push({
-                file,
-                pct: pct(lineCovered || statementCovered, lineTotal || statementTotal),
-                lines: {
-                  covered: lineCovered || statementCovered,
-                  total: lineTotal || statementTotal,
-                },
-              });
-            });
-          }
-
-          const pct = (covered, tot) => (tot > 0 ? ((covered / tot) * 100).toFixed(2) : '0.00');
-
-          console.log('### Test Coverage Summary :test_tube:');
-          console.log('');
-          console.log('| Metric | Coverage | Covered / Total |');
-          console.log('|--------|----------|-----------------|');
-          console.log(`| Lines | ${pct(totals.lines.covered, totals.lines.total)}% | ${totals.lines.covered} / ${totals.lines.total} |`);
-          console.log(`| Statements | ${pct(totals.statements.covered, totals.statements.total)}% | ${totals.statements.covered} / ${totals.statements.total} |`);
-          console.log(`| Branches | ${pct(totals.branches.covered, totals.branches.total)}% | ${totals.branches.covered} / ${totals.branches.total} |`);
-          console.log(`| Functions | ${pct(totals.functions.covered, totals.functions.total)}% | ${totals.functions.covered} / ${totals.functions.total} |`);
-
-          console.log('');
-          console.log('<details><summary>File coverage (lowest lines first)</summary>');
-          console.log('');
-          console.log('```');
-          fileSummaries
-            .sort((a, b) => (a.pct - b.pct) || (b.lines.total - a.lines.total))
-            .slice(0, 25)
-            .forEach(({ file, pct, lines }) => {
-              console.log(`${pct.toFixed(2)}%\t${lines.covered}/${lines.total}\t${file}`);
-            });
-          console.log('```');
-          console.log('</details>');
-
-          if (coverage) {
-            const pctValue = (covered, tot) => {
-              if (tot === 0) {
-                return '0';
-              }
-              return ((covered / tot) * 100)
-                .toFixed(2)
-                .replace(/\.?0+$/, '');
-            };
-
-            const formatLineRanges = (lines) => {
-              if (lines.length === 0) {
-                return '';
-              }
-              const ranges = [];
-              let start = lines[0];
-              let end = lines[0];
-
-              for (let i = 1; i < lines.length; i += 1) {
-                const current = lines[i];
-                if (current === end + 1) {
-                  end = current;
-                  continue;
-                }
-                ranges.push(start === end ? `${start}` : `${start}-${end}`);
-                start = current;
-                end = current;
-              }
-              ranges.push(start === end ? `${start}` : `${start}-${end}`);
-              return ranges.join(',');
-            };
-
-            const tableTotals = {
-              statements: { covered: 0, total: 0 },
-              branches: { covered: 0, total: 0 },
-              functions: { covered: 0, total: 0 },
-              lines: { covered: 0, total: 0 },
-            };
-            const tableRows = Object.entries(coverage)
-              .map(([file, entry]) => {
-                const fileCoverage = getFileCoverage(entry);
-                const lineHits = getLineHits(entry, fileCoverage);
-                const statementHits = entry.s ?? {};
-                const branchHits = entry.b ?? {};
-                const functionHits = entry.f ?? {};
-
-                const lineTotal = Object.keys(lineHits).length;
-                const lineCovered = Object.values(lineHits).filter((n) => n > 0).length;
-                const statementTotal = Object.keys(statementHits).length;
-                const statementCovered = Object.values(statementHits).filter((n) => n > 0).length;
-                const branchTotal = Object.values(branchHits).reduce((acc, branches) => acc + branches.length, 0);
-                const branchCovered = Object.values(branchHits).reduce(
-                  (acc, branches) => acc + branches.filter((n) => n > 0).length,
-                  0,
-                );
-                const functionTotal = Object.keys(functionHits).length;
-                const functionCovered = Object.values(functionHits).filter((n) => n > 0).length;
-
-                tableTotals.lines.total += lineTotal;
-                tableTotals.lines.covered += lineCovered;
-                tableTotals.statements.total += statementTotal;
-                tableTotals.statements.covered += statementCovered;
-                tableTotals.branches.total += branchTotal;
-                tableTotals.branches.covered += branchCovered;
-                tableTotals.functions.total += functionTotal;
-                tableTotals.functions.covered += functionCovered;
-
-                const uncoveredLines = getUncoveredLines(entry, fileCoverage, lineHits);
-
-                const filePath = entry.path ?? file;
-                const relativePath = path.isAbsolute(filePath)
-                  ? path.relative(process.cwd(), filePath)
-                  : filePath;
-
-                return {
-                  file: relativePath || file,
-                  statements: pctValue(statementCovered, statementTotal),
-                  branches: pctValue(branchCovered, branchTotal),
-                  functions: pctValue(functionCovered, functionTotal),
-                  lines: pctValue(lineCovered, lineTotal),
-                  uncovered: formatLineRanges(uncoveredLines),
-                };
-              })
-              .sort((a, b) => a.file.localeCompare(b.file));
-
-            const columns = [
-              { key: 'file', header: 'File', align: 'left' },
-              { key: 'statements', header: '% Stmts', align: 'right' },
-              { key: 'branches', header: '% Branch', align: 'right' },
-              { key: 'functions', header: '% Funcs', align: 'right' },
-              { key: 'lines', header: '% Lines', align: 'right' },
-              { key: 'uncovered', header: 'Uncovered Line #s', align: 'left' },
-            ];
-
-            const allFilesRow = {
-              file: 'All files',
-              statements: pctValue(tableTotals.statements.covered, tableTotals.statements.total),
-              branches: pctValue(tableTotals.branches.covered, tableTotals.branches.total),
-              functions: pctValue(tableTotals.functions.covered, tableTotals.functions.total),
-              lines: pctValue(tableTotals.lines.covered, tableTotals.lines.total),
-              uncovered: '',
-            };
-
-            const rowsForOutput = [allFilesRow, ...tableRows];
-            const formatRow = (row) => `| ${columns
-              .map(({ key }) => String(row[key] ?? ''))
-              .join(' | ')} |`;
-            const headerRow = `| ${columns.map(({ header }) => header).join(' | ')} |`;
-            const dividerRow = `| ${columns
-              .map(({ align }) => (align === 'right' ? '---:' : ':---'))
-              .join(' | ')} |`;
-
-            console.log('');
-            console.log('<details><summary>Vitest coverage table</summary>');
-            console.log('');
-            console.log(headerRow);
-            console.log(dividerRow);
-            rowsForOutput.forEach((row) => console.log(formatRow(row)));
-            console.log('</details>');
-          }
-          NODE
-
-      - name: Upload Coverage Artifact
-        if: steps.coverage-summary.outputs.has_coverage == 'true'
-        uses: actions/upload-artifact@bbbca2ddaa5d8feaa63e36b76fdaad77386f024f # v7.0.0
+      - name: Report coverage
+        if: ${{ env.CODECOV_TOKEN != '' }}
+        uses: codecov/codecov-action@1af58845a975a7985b0beb0cbe6fbbb71a41dbad # v5.5.3
         with:
-          name: web-coverage-report
-          path: web/coverage
-          retention-days: 30
-          if-no-files-found: error
+          directory: web/coverage
+          flags: web
+        env:
+          CODECOV_TOKEN: ${{ env.CODECOV_TOKEN }}
 
   web-build:
     name: Web Build