Fix retrieval function when metadata_condtion is specified in retrieval API (#13473)

### What problem does this PR solve?

Fix https://github.com/infiniflow/ragflow/issues/13388

The following command returns empty when there is doc with the meta data
```
curl --request POST \
     --url http://localhost:9222/api/v1/retrieval \
     --header 'Content-Type: application/json' \
     --header 'Authorization: Bearer ragflow-fO3mPFePfLgUYg8-9gjBVVXbvHqrvMPLGaW0P86PvAk' \
     --data '{
          "question": "any question",
          "dataset_ids": ["9bb4f0591b8811f18a4a84ba59049aa3"],
           "metadata_condition": {
            "logic": "and",
            "conditions": [
              {
                "name": "character",
                "comparison_operator": "is",
                "value": "刘备"
              }
            ]
          }
     }'
```

When metadata_condtion is specified in the retrieval API, it is
converted to doc_ids and doc_ids is passed to retrieval function.
In retrieval funciton, when doc_ids is explicitly provided , we should
bypass threshold.


### Type of change

- [x] Bug Fix (non-breaking change which fixes an issue)

test/testcases/test_http_api/test_file_management_within_dataset/test_doc_sdk_routes_unit.py

@@ -220,6 +220,11 @@ def _load_doc_module(monkeypatch):
     
     tenant_llm_service_mod.TenantService = _StubTenantService
     tenant_llm_service_mod.TenantLLMService = _StubTenantLLMService
+
+    class _StubLLMFactoriesService:
+        pass
+
+    tenant_llm_service_mod.LLMFactoriesService = _StubLLMFactoriesService
     monkeypatch.setitem(sys.modules, "api.db.services.tenant_llm_service", tenant_llm_service_mod)
 
     # Mock LLMService
@@ -993,7 +998,7 @@ class TestDocRoutesUnit:
             "get_request_json",
             lambda: _AwaitableValue({"dataset_ids": ["ds-1"], "question": "q", "metadata_condition": {"logic": "and"}}),
         )
-        monkeypatch.setattr(module.DocMetadataService, "get_meta_by_kbs", lambda _ids: [])
+        monkeypatch.setattr(module.DocMetadataService, "get_flatted_meta_by_kbs", lambda _kbs: [])
         monkeypatch.setattr(module, "meta_filter", lambda *_args, **_kwargs: [])
         res = _run(module.retrieval_test.__wrapped__("tenant-1"))
         assert "code" in res